World’s Soils Have Lost 133bn Tonnes of Carbon Since the Dawn of Agriculture
By Daisy Dunne
The world's soils have lost a total of 133bn tonnes of carbon since humans first started farming the land around 12,000 years ago, new research suggests. And the rate of carbon loss has increased dramatically since the start of the industrial revolution.
The study, which maps where soil carbon has been lost and gained since 10,000 BC, shows that crop production and cattle grazing have contributed almost equally to global losses.
Understanding how agriculture has altered soil carbon stocks is critical to finding ways to restore lost carbon to the ground, another scientist tells Carbon Brief, which could help to buffer the CO2 accumulating in the atmosphere.
Soil as a Carbon Sink
The top meter of the world's soils contains three times as much carbon as the entire atmosphere, making it a major carbon sink alongside forests and oceans.
Soils play a key role in the carbon cycle by soaking up carbon from dead plant matter. Plants absorb CO2 from the atmosphere through photosynthesis, and pass carbon to the ground when dead roots and leaves decompose.
But human activity, in particular agriculture, can cause carbon to be released from the soil at a faster rate than it is replaced. This net release of carbon to the atmosphere contributes to global warming.
New research, published in the Proceedings of the National Academy of Sciences, estimates the total amount of carbon that has been lost since humans first settled into agricultural life around 12,000 years ago.
The research finds that 133bn tonnes of carbon, or 8 percent of total global soil carbon stocks, may have been lost from the top two meters of the world's soil since the dawn of agriculture. This figure is known as the total "soil carbon debt."
Around two-thirds of lost carbon could have ended up in the atmosphere, while the rest may have been transported further afield before being deposited back into the soil.
And since the industrial revolution, the rate of soil carbon loss has increased, said lead author Dr. Jonathan Sanderman, a scientist at the Woods Hole Research Center in Massachusetts. He told Carbon Brief:
"Considering humans have emitted about 450bn tonnes of carbon since the industrial revolution, soil carbon losses to the atmosphere may represent 10 to 20% of this number. But it has hard to calculate exactly how much of this has ended up in the atmosphere versus how much has been transported due to erosion."
'Hotspots' for Carbon Loss
As part of the study, the researchers designed an artificially intelligent model that used an existing global soil dataset to estimate past levels of soil carbon stocks, Sanderman said.
"We used a dataset which defines 10,000 BC as a world without a human footprint. What we did was develop a model that could explain the current distribution of soil carbon across the globe as a function of climate, topography [physical features], geology and land use. Then we replaced current land use with historic reconstructions including the 'no land use' case to get predictions of soil carbon levels back in time."
To calculate an overall soil carbon debt, the researchers subtracted the amount of current global soil carbon from the amount of soil carbon predicted to have existed in the era before human agriculture. The model also allowed the researchers to estimate global soil carbon stocks at different points throughout history, including at the advent of the industrial revolution.
The results allow scientists to get a clearer picture on how 12,000 years of human agriculture have affected the world's soil stocks, said Sanderman.
"More carbon has been lost due to agriculture than has generally been recognized and a lot of this loss predated the industrial revolution. This loss isn't equally distributed across agricultural land. Some regions stand out as having lost the most carbon."
Map B below shows the regions that have experienced the most soil carbon loss, and includes the U.S. corn belt and western Europe. The red shading represents the very highest level of soil carbon loss since 10,000 BC, while blue shows the highest level of carbon gain.
Map A shows the global distribution and intensity of crop production (red) and cattle grazing (green) and map B shows regional changes to soil carbon stocks since 10,000 BC. On map B, blue represents the highest level of soil carbon gain since 10,000 BC, while red shows the highest level of carbon loss. Black shows unfarmed desert regions.
The U.S. corn belt and western Europe are likely to have experienced high levels of soil carbon loss as a result of long periods of intense crop production, said Sanderman.
However, the analysis also reveals a number of regions which have seen high levels of soil carbon loss despite having relatively little farming. These "hot spots"—including the rangelands of Argentina, southern Africa and parts of Australia—are considered to be particularly vulnerable to land degradation driven by agriculture, said Sanderman.
"Semi-arid and arid grasslands [the hotspots] are particularly vulnerable to potentially irreversible degradation if grazing intensity is too high. That's because there isn't a lot of soil carbon to start with and there can often be a complete shift in vegetation cover leading to lots of erosion."
Map A shows the distribution and intensity of crop production (red) and cattle grazing (green) across the world. Both have contributed almost equally to loss of soil carbon stocks, Sanderman said.
Repaying the Debt
Identifying how much carbon has been lost from the soil could also help scientists understand how much could be replenished, if soils were managed so that they took up more carbon from the atmosphere than they released into it.
Soil carbon management is one of a number of negative emissions technologies (NETs) that could help to remove greenhouse gases from the air. Research suggests that NETs will be key to meeting the Paris agreement, which aims to keep warming "well below" 2C above pre-industrial temperatures, while striving to limit increases to 1.5C.
In theory, soils could be managed in a way that would allow them to reabsorb all of the carbon that has been lost since the agricultural revolution. In practice, however, this is highly unlikely, Sanderman explained.
"This figure [133bn tonnes of carbon] is likely a maximum potential if we were willing to give up agriculture and completely restore natural ecosystems. That is obviously not going to happen, so the real potential—giving the constraint of needing to feed 10 billion people by 2050—is going to be a lot lower."
"Modifying large-scale agricultural practices to restore some of these lost soil carbon stocks might be a valuable strategy in our efforts to dampen climate change. If regenerative agriculture can restore some of the carbon that we have lost, then it might be a really valuable tool in our fight against climate change."
However, the study lacks clarity on how it considers peat soils, said Prof. Meine van Noordwijk, chief science advisor at the World Agroforestry Centre in Kenya, who also wasn't involved in the study.
Peat is a type of soil made up of waterlogged partially-decomposed plant material such as moss, which builds up over thousands of years in wetland environments including bogs.
Peat soils are thought to contain up to half of global soil carbon stocks, van Noordwijk explain to Carbon Brief, and so are of particular concern:
"Peat soils require and currently receive separate attention. Water management [of wetland soils] is a relevant part of agricultural use, leading to [carbon] losses, but also indicating opportunities for restoration."
Reposted with permission from our media associate Carbon Brief.
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By Ana Maldonado-Contreras
- Your gut is home to trillions of bacteria that are vital for keeping you healthy.
- Some of these microbes help to regulate the immune system.
- New research, which has not yet been peer-reviewed, shows the presence of certain bacteria in the gut may reveal which people are more vulnerable to a more severe case of COVID-19.
You may not know it, but you have an army of microbes living inside of you that are essential for fighting off threats, including the virus that causes COVID-19.
How Do Resident Bacteria Keep You Healthy?<p>Our immune defense is part of a complex biological response against harmful pathogens, such as viruses or bacteria. However, because our bodies are inhabited by trillions of mostly beneficial bacteria, virus and fungi, activation of our immune response is tightly regulated to distinguish between harmful and helpful microbes.</p><p>Our bacteria are spectacular companions diligently helping prime our immune system defenses to combat infections. A seminal study found that mice treated with antibiotics that eliminate bacteria in the gut exhibited an impaired immune response. These animals had low counts of virus-fighting white blood cells, weak antibody responses and poor production of a protein that is vital for <a href="https://doi.org/10.1073/pnas.1019378108" target="_blank">combating viral infection and modulating the immune response</a>.</p><p><a href="https://doi.org/10.1371/journal.pone.0184976" target="_blank" rel="noopener noreferrer">In another study</a>, mice were fed <em>Lactobacillus</em> bacteria, commonly used as probiotic in fermented food. These microbes reduced the severity of influenza infection. The <em>Lactobacillus</em>-treated mice did not lose weight and had only mild lung damage compared with untreated mice. Similarly, others have found that treatment of mice with <em>Lactobacillus</em> protects against different <a href="https://doi.org/10.1038/srep04638" target="_blank" rel="noopener noreferrer">subtypes of</a> <a href="https://doi.org/10.1038/s41598-017-17487-8" target="_blank" rel="noopener noreferrer">influenza</a> <a href="https://doi.org/10.1371/journal.ppat.1008072" target="_blank" rel="noopener noreferrer">virus</a> and human respiratory syncytial virus – the <a href="https://doi.org/10.1038/s41598-019-39602-7" target="_blank" rel="noopener noreferrer">major cause of viral bronchiolitis and pneumonia in children</a>.</p>
Chronic Disease and Microbes<p>Patients with chronic illnesses including Type 2 diabetes, obesity and cardiovascular disease exhibit a hyperactive immune system that fails to recognize a harmless stimulus and is linked to an altered gut microbiome.</p><p>In these chronic diseases, the gut microbiome lacks bacteria that activate <a href="https://doi.org/10.1126/science.1198469" target="_blank" rel="noopener noreferrer">immune cells</a> that block the response against harmless bacteria in our guts. Such alteration of the gut microbiome is also observed in <a href="https://doi.org/10.1073/pnas.1002601107" target="_blank" rel="noopener noreferrer">babies delivered by cesarean section</a>, individuals consuming a poor <a href="https://doi.org/10.1038/nature12820" target="_blank" rel="noopener noreferrer">diet</a> and the <a href="https://doi.org/10.1038/nature11053" target="_blank" rel="noopener noreferrer">elderly</a>.</p><p>In the U.S., 117 million individuals – about half the adult population – <a href="https://health.gov/our-work/food-nutrition/2015-2020-dietary-guidelines/guidelines/" target="_blank" rel="noopener noreferrer">suffer from Type 2 diabetes, obesity, cardiovascular disease or a combination of them</a>. That suggests that half of American adults carry a faulty microbiome army.</p><p>Research in my laboratory focuses on identifying gut bacteria that are critical for creating a balanced immune system, which fights life-threatening bacterial and viral infections, while tolerating the beneficial bacteria in and on us.</p><p>Given that diet affects the diversity of bacteria in the gut, <a href="https://www.umassmed.edu/nutrition/melody-trial-info/" target="_blank" rel="noopener noreferrer">my lab studies show how diet can be used</a> as a therapy for chronic diseases. Using different foods, people can shift their gut microbiome to one that boosts a healthy immune response.</p><p>A fraction of patients infected with SARS-CoV-2, the virus that causes COVID-19 disease, develop severe complications that require hospitalization in intensive care units. What do many of those patients have in common? <a href="https://www.cdc.gov/mmwr/volumes/69/wr/mm6912e2.htm" target="_blank" rel="noopener noreferrer">Old age</a> and chronic diet-related diseases like obesity, Type 2 diabetes and cardiovascular disease.</p><p><a href="http://doi.org/10.1016/j.jada.2008.12.019" target="_blank" rel="noopener noreferrer">Black and Latinx people are disproportionately affected by obesity, Type 2 diabetes and cardiovascular disease</a>, all of which are linked to poor nutrition. Thus, it is not a coincidence that <a href="https://www.cdc.gov/mmwr/volumes/69/wr/mm6933e1.htm" target="_blank" rel="noopener noreferrer">these groups have suffered more deaths from COVID-19</a> compared with whites. This is the case not only in the U.S. but also <a href="https://www.washingtonpost.com/world/europe/blacks-in-britain-are-four-times-as-likely-to-die-of-coronavirus-as-whites-data-show/2020/05/07/2dc76710-9067-11ea-9322-a29e75effc93_story.html" target="_blank" rel="noopener noreferrer">in Britain</a>.</p>
Discovering Microbes That Predict COVID-19 Severity<p>The COVID-19 pandemic has inspired me to shift my research and explore the role of the gut microbiome in the overly aggressive immune response against SARS-CoV-2 infection.</p><p>My colleagues and I have hypothesized that critically ill SARS-CoV-2 patients with conditions like obesity, Type 2 diabetes and cardiovascular disease exhibit an altered gut microbiome that aggravates <a href="https://theconversation.com/exercise-may-help-reduce-risk-of-deadly-covid-19-complication-ards-136922" target="_blank" rel="noopener noreferrer">acute respiratory distress syndrome</a>.</p><p>Acute respiratory distress syndrome, a life-threatening lung injury, in SARS-CoV-2 patients is thought to develop from a <a href="http://doi.org/10.1016/j.cytogfr.2020.05.003" target="_blank" rel="noopener noreferrer">fatal overreaction of the immune response</a> called a <a href="https://theconversation.com/blocking-the-deadly-cytokine-storm-is-a-vital-weapon-for-treating-covid-19-137690" target="_blank" rel="noopener noreferrer">cytokine storm</a> <a href="http://doi.org/10.1016/S2213-2600(20)30216-2" target="_blank" rel="noopener noreferrer">that causes an uncontrolled flood</a> <a href="http://doi.org/10.1016/S2213-2600(20)30216-2" target="_blank" rel="noopener noreferrer">of immune cells into the lungs</a>. In these patients, their own uncontrolled inflammatory immune response, rather than the virus itself, causes the <a href="http://doi.org/10.1007/s00134-020-05991-x" target="_blank" rel="noopener noreferrer">severe lung injury and multiorgan failures</a> that lead to death.</p><p>Several studies <a href="https://doi.org/10.1016/j.trsl.2020.08.004" target="_blank" rel="noopener noreferrer">described in one recent review</a> have identified an altered gut microbiome in patients with COVID-19. However, identification of specific bacteria within the microbiome that could predict COVID-19 severity is lacking.</p><p>To address this question, my colleagues and I recruited COVID-19 hospitalized patients with severe and moderate symptoms. We collected stool and saliva samples to determine whether bacteria within the gut and oral microbiome could predict COVID-19 severity. The identification of microbiome markers that can predict the clinical outcomes of COVID-19 disease is key to help prioritize patients needing urgent treatment.</p><p><a href="https://doi.org/10.1101/2021.01.05.20249061" target="_blank" rel="noopener noreferrer">We demonstrated</a>, in a paper which has not yet been peer reviewed, that the composition of the gut microbiome is the strongest predictor of COVID-19 severity compared to patient's clinical characteristics commonly used to do so. Specifically, we identified that the presence of a bacterium in the stool – called <em>Enterococcus faecalis</em>– was a robust predictor of COVID-19 severity. Not surprisingly, <em>Enterococcus faecalis</em> has been associated with <a href="https://doi.org/10.1053/j.gastro.2011.05.035" target="_blank" rel="noopener noreferrer">chronic</a> <a href="https://doi.org/10.1016/S0002-9440(10)61172-8" target="_blank" rel="noopener noreferrer">inflammation</a>.</p><p><em>Enterococcus faecalis</em> collected from feces can be grown outside of the body in clinical laboratories. Thus, an <em>E. faecalis</em> test might be a cost-effective, rapid and relatively easy way to identify patients who are likely to require more supportive care and therapeutic interventions to improve their chances of survival.</p><p>But it is not yet clear from our research what is the contribution of the altered microbiome in the immune response to SARS-CoV-2 infection. A recent study has shown that <a href="https://doi.org/10.1101/2020.12.11.416180" target="_blank" rel="noopener noreferrer">SARS-CoV-2 infection triggers an imbalance in immune cells</a> called <a href="https://doi.org/10.1111/imr.12170" target="_blank" rel="noopener noreferrer">T regulatory cells that are critical to immune balance</a>.</p><p>Bacteria from the gut microbiome are responsible for the <a href="https://doi.org/10.7554/eLife.30916.001" target="_blank" rel="noopener noreferrer">proper activation</a> <a href="https://doi.org/10.1126/science.1198469" target="_blank" rel="noopener noreferrer">of those T-regulatory</a> <a href="https://doi.org/10.1038/nri.2016.36" target="_blank" rel="noopener noreferrer">cells</a>. Thus, researchers like me need to take repeated patient stool, saliva and blood samples over a longer time frame to learn how the altered microbiome observed in COVID-19 patients can modulate COVID-19 disease severity, perhaps by altering the development of the T-regulatory cells.</p><p>As a Latina scientist investigating interactions between diet, microbiome and immunity, I must stress the importance of better policies to improve access to healthy foods, which lead to a healthier microbiome. It is also important to design culturally sensitive dietary interventions for Black and Latinx communities. While a good-quality diet might not prevent SARS-CoV-2 infection, it can treat the underlying conditions related to its severity.</p><p><em><a href="https://theconversation.com/profiles/ana-maldonado-contreras-1152969" target="_blank">Ana Maldonado-Contreras</a> is an assistant professor of Microbiology and Physiological Systems at the University of Massachusetts Medical School.</em></p><p><em>Disclosure statement: Ana Maldonado-Contreras receives funding from The Helmsley Charitable Trust and her work has been supported by the American Gastroenterological Association. She received The Charles A. King Trust Postdoctoral Research Fellowship. She is also member of the Diversity Committee of the American Gastroenterological Association.</em></p><p><em style="">Reposted with permission from <a href="https://theconversation.com/a-healthy-microbiome-builds-a-strong-immune-system-that-could-help-defeat-covid-19-145668" target="_blank" rel="noopener noreferrer" style="">The Conversation</a>. </em></p>
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